Habitat perforation changes bat species composition and acoustic activity in forest remnants

The Kingston Lab is happy to share a new publication from Ashraf and Tigga, just out in Biodiversity and Conservation. This work examines how small-scale habitat modification within protected forests can affect bat communities and activity, even before extensive forest loss occurs.

One of the key questions of the Anthropocene is how habitat fragmentation affects biodiversity. While fragmentation has been widely studied, much less attention has been given to its earliest stage, known as habitat perforation. Habitat perforation occurs when small clearings appear within otherwise unmodified forests, creating edges and gaps that alter the natural forest structure. Although recognized for more than three decades, its effects on biodiversity inside protected areas remain poorly understood.

Protected areas in northeastern Bangladesh have already been perforated by human activities. Depending on the protected area, agroforest perforations cover about 15–32% of its total area. These perforations result from commercial and small-scale agriculture, selective and illegal logging, land clearing, and human settlements.

We examined how habitat perforation within protected areas and tea plantations outside them influences bat communities in three protected areas of Bangladesh. We found that bat diversity was highest in unmodified forests. Although perforation had not yet fully altered the overall bat community, perforated habitats created opportunities for bats that forage along forest edges, in gaps, and in open spaces, while gradually filtering out bats that depend on undisturbed forest interiors. We also found that bat acoustic activity was highest in tea plantations, largely because these habitats were dominated by edge- and open-space foraging species.

The rarefaction and extrapolation curves compare estimated bat diversity between unmodified forest (green) and agroforest perforations (orange), based on captures from three protected areas in Bangladesh. Harp trap results are shown in the top row, and mist net results in the bottom row. The x-axis shows the number of bats captured, and the y-axis shows estimated bat diversity. Harp traps detected greater bat diversity in forest sites across all three measures: species richness (Hill number 0), Shannon diversity (Hill number 1), and inverse Simpson diversity (Hill number 2). Mist nets captured greater species richness (Hill number 0) in agroforest perforations, but forest sites showed higher Shannon and inverse Simpson diversity (Hill numbers 1 and 2) when species abundances were considered. This suggests that mist net captures in agroforest perforations included more species but were dominated by a few abundant species. Although the differences were not conclusive, the two complementary trapping methods together suggest that even small, human-modified agroforest clearings within protected forests may be associated with early changes in bat diversity.

Our findings highlight the importance of identifying and preventing new perforations within protected areas before fragmentation becomes more severe. Protecting structurally complex forest interiors and maintaining connectivity across the landscape are essential for conserving forest-dependent bats and preventing the gradual loss of biodiversity within protected areas.

Find the full paper is here

When Hunters Leave Their Mark: Ben’s New Paper on Bat Roost Use in Nigeria

The Kingston Lab is happy to share a new publication from Ben and Tigga, just out in Animal Conservation. This one comes from years of hard fieldwork in the caves of Cross River State, Nigeria, and the findings are striking.

We set out to understand what influences Egyptian fruit bats (Rousettus aegyptiacus) to use some caves and not others. Cave area, cave complexity, cave temperature and humidity, dominant tree height etc…. all the factors known to influence roost selection in bats were accounted for. Our findings showed that hunting pressure from humans was the most important driver of roost use. Caves showing the highest levels of hunting pressure, measured using counts of abandoned hunting sticks, held the fewest bats and in many cases none at all. We also identified a clear threshold: beyond six hunting sticks, bat abundance drops sharply, suggesting that’s the point at which bats start abandoning roosts or are hunted to local extinction. Meanwhile, the two caves holding the biggest colonies in the landscape? Completely inaccessible to hunters. The bats, it seems, know what’s good for them.

Hunting pressure was the strongest predictor of the Egyptian fruit bat abundance across 27 caves. Abundance declined sharply beyond a threshold of six hunting sticks, after which bats start to abandon cave roosts. Intense hunting (for consumption) pressure redistributes bats across the landscape, with serious conservation and One Health implications as this species is a natural reservoir of Marburg virus. 

The conservation implications are significant on their own – R. aegyptiacus has slow reproductive rates, and offtake of up to 4000 bats per cave visit (as we observed in this study) makes recovery extremely difficult. But the One Health angle makes this even more urgent. This species is a known reservoir of Marburg virus, and intense hunting is redistributing bats across the landscape, and also concentrating large aggregations near human settlements, potentially increasing spillover risk.

Check out the full paper here!

New publication: Limestone Karst Ecology and Human Impacts on Cave Bats in Myanmar

The Kingston lab is excited to share a new publication from Moe Moe! Her research highlights the ecological importance of limestone karst caves in Southern Shan State, Myanmar, as key habitats for diverse and understudied bat species. These bats play crucial roles in maintaining ecosystem balance through insect control, pollination, and nutrient cycling.

The study found that cave characteristics such as size and temperature strongly influence bat populations, while human disturbances—such as guano harvesting, hunting, and cave development—negatively impact their abundance.

Fig. 2. Distribution of Bat Cave Vulnerability (BV) classes across 38 surveyed caves. BV classes were derived following the Bat Cave Vulnerability Index (BCVI) framework and categorized as A – High vulnerability, B – Moderate vulnerability, and C – Low vulnerability. Numbers in parentheses indicate the number of caves assigned to each class.

With many caves identified as vulnerable, this research emphasizes the urgent need for conservation efforts to protect biodiversity and reduce potential public health risks associated with human–bat interactions. Find the full paper is here: https://doi.org/10.1016/j.gecco.2026.e04071

Drivers of bat researchers’ intent to adopt field hygiene practices

The Kingston Lab is excited to share a new publication from Tigga and colleagues and published in Conservation Biology. This work took considerable time and careful thought to bring together. We’re very pleased to see it published and available to the wider bat research community, with important implications for wildlife research, field safety, and One Health.

The study analyzed responses from approximately 1,000 bat researchers and examined the factors influencing their intention to follow field hygiene practices, including the use of personal protective equipment (PPE). Overall, the researchers found that bat researchers had a high intention to adopt field hygiene practices.

Mentors were the most influential source of encouragement, followed by regulatory bodies, fellow researchers, and mentees. The study also found that perceptions that hygiene practices were impractical or uncomfortable were important barriers to their adoption.

 A structural equation model of drivers of the intent to adopt field hygiene (FH) behaviors by nondisease bat researchers. The model is built around the Theory of Planned Behavior, and as can be seen here, intent to adopt field hygiene is strongly influenced by the subjective norm and perceived behavioral control.

We found that bat researchers recognize and accept the importance of protecting both bats and people and of preventing cross-contamination of samples. The findings highlight the significant role of senior researchers in modeling good field hygiene practices and encouraging students and early-career researchers to follow them. This study also emphasizes the need for education, practical solutions, and supportive policies in wildlife research.

Although the study focuses on bat researchers, its findings have broader implications for wildlife research and One Health, as fieldwork involving wild animals can create opportunities for pathogen transmission. Therefore, promoting strong field hygiene practices across the wildlife research community can help protect researchers, wildlife, and public health.

Find the full paper here:

Kingston Lab publications in 2024 – a wonderfully collaborative year focusing on One Health, trade in bats and human dimensions of bat conservation

We had a diverse range of publications come out this year, many of which illustrate the power of integrative and large team efforts. In March, a great team of disease ecologists, bat biologists, and policy experts, led by the inimitable Professor Raina Plowright, detailed a context-dependent tiered approach to minimize spillover of pathogens from bat to human populations through protection and restoration of places where bats feed, rest and aggregate. These ecological countermeasures are laid out as a model approach for diverse taxa. Tigga and former lab member Dr Iroro Tanshi contributed.

Plowright, R.K., Ahmed, A.N., Coulson, T. et al. Ecological countermeasures to prevent pathogen spillover and subsequent pandemics. Nat Commun 15, 2577 (2024). https://doi.org/10.1038/s41467-024-46151-9

Bat field research frequently involves direct or close contact with bats, an interface that could potentially lead to spillover either from bats to humans or humans to bats. To empower the global bat research community to better protect themselves and bats, the  IUCN Species Survival Commission (SSC) Bat Specialist Group (BSG) One Health Working Group (OHWG) issued comprehensive guidelines for Field Hygiene in June of this year:

Shapiro, J.T., Phelps, K., Racey, P., Vincent a., Viquez-R, L., Walsh, A., Weiberg, M and Kingston, T. (2204) IUCN SSC BSG Guidelines for Field Hygiene. https://zenodo.org/records/12169643

The OHWG has been promoting the Guidelines through webinars, talks and demonstrations around the world, including the European Bat Research Symposium, National Bat Conference UK, 5th International Southeast Asian Bat Conference. Related, several members of the IUCN SSC BSG’s OHWG (Tigga, Wanda Markotter, Paul Racey, Lisa Worledge) contributed to a review, and something of a Public Service Announcement, of the need for bat handlers to be vaccinated against rabies.

M. Brock Fenton, Paul A. Faure, Enrico Bernard, Daniel J. Becker, Alan C. Jackson, Tigga Kingston, Peter H.C. Lina, Wanda Markotter, Susan M. Moore, Samira Mubareka, Paul A. Racey, Charles E. Rupprecht, and Lisa Worledge. 2024. Bat handlers, bat bites, and rabies: vaccination and serological testing of humans at risk. FACETS9(): 1-11. https://doi.org/10.1139/facets-2024-0056

The IUCN SSC BSG Bat Trade Working Group (BTWG) also produced a significant publication this year, with contributions from Tigga, Abby, and former lab member Dr Joe Chun-Chia Huang. The paper quantified the online trade in the US in the distinctive Kerivoula picta and received a lot of national and international attention, including coverage in the New York Times. Ultimately, it led to eBay removing all bat listings from their sites around the world (big THANK YOU eBay!).

Coleman, J.L., Randhawa, N., Huang, J.CC. et al. Dying for décor: quantifying the online, ornamental trade in a distinctive bat species, Kerivoula pictaEur J Wildl Res 70, 75 (2024). https://doi.org/10.1007/s10344-024-01829-9

Lab members also contributed to other IUCN BSG efforts, with Abby developing code to calculate EOO (extent of occurrence) and AOO (area of occurrence) used in Red List Assessments:

Monadjem, A., Montauban, C., Webala, P.W. et al. African bat database: curated data of occurrences, distributions and conservation metrics for sub-Saharan bats. Sci Data 11, 1309 (2024). https://doi.org/10.1038/s41597-024-04170-7

and Touseef leading the Red List Assessment for Pteropus medius:         

Ahmed, T., Murugavel, B., Sharma, B., Ul-Husan, A. & Salim, M. 2024. Pteropus medius. The IUCN Red List of Threatened Species 2024: e.T18725A230958344. https://www.iucnredlist.org/ja/species/18725/230958344

Related, Ben and Iroro contributed to a huge dataset of intactness estimates across Africa:

Clements, H.S., Do Linh San, E., Hempson, G. et al. The bii4africa dataset of faunal and floral population intactness estimates across Africa’s major land uses. Sci Data 11, 191 (2024). https://doi.org/10.1038/s41597-023-02832-6

Finally, two papers focused on human sentiments towards bats. The first was led by Amir Batrice, a former undergraduate researcher in the lab who worked with Abby to explore how people in Asia respond to posts of bat exploitation on social media:

Batrice, A. A., Kingston, T., & Rutrough, A. L. (2024). Measuring Asian Social Media Sentiments Toward Bat Exploitation. Anthrozoös37(4), 619–635. https://doi.org/10.1080/08927936.2024.2345474

The second took a deeper dive into the role of emotions towards bats, focusing on how emotions towards bats changed through COVID-19 and influence intent to perform bat-conservation actions. Four of the contributors (Tanja Straka, Joanna Coleman, Ewan MacDonald and Tigga) are members of the IUCN BSG Human Dimensions Working Group.

Straka, T.M., Coleman, J.L., Macdonald, E.A. et al. Beyond biophobia: positive appraisal of bats among German residents during the COVID-19 pandemic - with consequences for conservation intentions. Biodivers Conserv 33, 2549–2565 (2024). https://doi.org/10.1007/s10531-024-02872-3

Bridging Gaps in One Health research: Touseef’s Call for Research in Environmental and Ecological Issues and Sustainable Food Systems

Touseef and co-authors conducted a comparative analysis of abstracts presented at the 1st (2011) and 6th (2020) World One Health Congresses (WOHC) to examine the evolution and current state of One Health research, focusing on demographic, disciplinary scope, and geographical representation. 

Key findings include:

  • Disease Surveillance remained the most represented research category at both congresses, indicating a consistent priority within One Health research.
  • Environmental and Ecological Issues and Sustainable Food Systems were among the least represented categories, despite the growing global emphasis on sustainable development challenges.
  • A significant increase in Antimicrobial Resistance (AMR) research, from 1% of abstracts in 2011 to 13% in 2020, highlights evolving research priorities.
  • Authors from Very High Human Development index countries tended to focus on Public Policy, whereas those from Medium and Low Human Development countries prioritized Disease Surveillance, indicating potential regional differences in One Health research priorities.
  • International collaboration is instrumental in enhancing participation from countries with lower human development indexes, although discrepancies remain in the representation of global regions and the alignment between funding recipients and research subjects.

The Skypuppies Are in Peril – Why Does it Matter?

The plight of large fruit bats on paleotropical islands was flagged over half a century ago. Despite this, species of Pteropus, Acerodon, and related genera of Large Old World Fruit Bats (herein, LOWFB) remain among the most endangered bat groups globally. Naturally, Tigga stepped up collaborating with esteemed bat scientists F.B. Vincent Florens and Christian E. Vincenot to explore this pressing issue. They utilized the IUCN Red List assessments and information from the literature to uncover why these bats are in trouble. No surprise here – habitat loss, hunting, climate change, and persecution (Let’s dub them the BIG FOUR) pose significant threats to the LOWFB. These poor bats are built differently, with biological and ecological attributes that make them even more vulnerable to these threats, accelerating their population decline.

Viewer discretion is advised!😔 Sourced: Social media.

So why should we care? Well, because they’re keystone species! Losing these skypuppies could set off a domino effect throughout native ecosystems. Check out the publication to discover more about the proposed conservation strategies aimed at halting the decline of these critical bats, especially in island habitats.

Bangladesh Has at Least 31 Bat Species! – Ashraf’s first PhD paper is out

Bat research is limited in Bangladesh, so to date estimates of bat diversity in the country have been based on a few ad hoc studies and expert opinion.  To gain a more complete understanding, Ashraf compiled species occurrence data from the literature, museum records and the Global Biodiversity Information Framework (GBIF). He set out to confirm species presence and identify species that might be expected to occur in Bangladesh based on occurrence records in neighboring countries and habitat preferences. To visualize the distribution of bats, Ashraf made maps for each species recorded from Bangladesh and species that might occur in the country.

He found a total of 31 species are recorded for Bangladesh – but only 22 are associated with voucher records. Evidence for nine species came from photographs and/or human observation. An additional 81 species were recorded from surrounding countries. Of these, 38 species are highly likely to occur in Bangladesh.

Ashraf holding a female Greater false vampire bat (Lyroderma lyra) carrying its pup captured from his study site in Bangladesh

So what is next? To expand the country list, Ashraf recommended that surveys of bats in Protected Areas, caves and wetlands be prioritized. Surveys should use multiple methods, including contemporary techniques (harp traps and acoustics) that have not been used in Bangladesh before, as well as traditional ones (mist nets). He emphasized that voucher specimen collections are needed to confirm the presence of and distribution of bats in Bangladesh and identify areas central to bat conservation.

The locality records based on Ashraf’s study show the distribution of Greater false vampire bat (Lyroderma lyra) in Bangladesh

Citation: Ul Hasan, M. A., & Kingston, T. (2022). Bats of Bangladesh—A Systematic Review of the Diversity and Distribution with Recommendations for Future Research. Diversity, 14(12), 1042. https://doi.org/10.3390/d14121042

Publication link: https://www.mdpi.com/1424-2818/14/12/1042

Supplementary Materials (Listing S1, and Scheme S1): https://www.mdpi.com/article/10.3390/d14121042/s1

Supplementary Materials (Figure S1, Figure S2, Table S1, Table S2): https://datadryad.org/stash/dataset/doi:10.5061/dryad.5tb2rbp7j

Baobabs and bats – new publication on the influence of the landscape and plant traits on fruiting success

Baobab (Adansonia digitata) trees are iconic symbols of the arid lands of continental Africa, and aside from some populations in Southern Africa are largely dependent on fruit bats for pollination. However, the bats visit a diversity of plant species to meet their energetic and nutritional needs, so the pollination service they provide the baobabs may be influenced by the landscape context of individual trees. In collaboration with Dr Paul Webala, Macy Krishnamoorthy set out to determine the relative contribution of individual plant traits, namely tree height and girth, and landscape features and context (e.g., the distance of baobab trees to conspecifics, distances to resources that might attract or distract bats, land use) to baobab reproductive success. Very ably assisted by Mr Michael Bartonjo, she mapped more than 700 baobab trees in ~10 km2 area in Kenya, measured them, and derived a number of landscape variables for each tree. She counted the number of fruit per baobab as a measure of reproductive success.

A mighty baobab with Paul Webala’s magic field bus beneath it for scale

So what did she find? Perhaps not surprisingly, larger trees were more likely to produce fruit and produce more fruit, but landscape variables also played a role, but in a complex and scale-dependent way. The importance of distance to and density of alternate food resources changed with scale, but generally, pawpaws tended to act as attractants whereas figs distracted bats from their role as pollinators.

Eopmorphorus wahlbergi – one of the fruit bat species known to pollinate baobabs

You can read the full story here:

Krishnamoorthy, M.A., Webala, P.W. & Kingston, T. Baobab fruiting is driven by scale-dependent mediation of plant size and landscape features. Landsc Ecol (2022).

Macy in a baobab tree! Baobab trees can live for well over 1000 years and reach up to 5 m in diameter at breast height, so they make for good climbing.

Fieldwork was fun but arduous and there are many people in Kenya to thank! A special thank you to Macy’s local host Daniel Ngei and his family, the local chief Joseph Kavui and all the landowners in the villages of Kaai, Kalesi, Kaluku South, Kandundu, Katithini, Kavui, Kawula, Kiwaani, Mutoleka, Ngieni East, Ngieni West and Yungamaduu who generously allowed us to sample baobabs or others fruiting trees on their lands. Funding for the project came from Bat Conservation Internationa, the Association of Biologists at Texas Tech University, and the Department of Biological Sciences at TTU.

Bats love the baobab flowers, but the fruits are quite a local snack for people. Here they have been dyed green to be sold for $0.05 a bag.